diabetes
Diabetes
¶
Bases: Dataset
A PyTorch Dataset for regression. A toy data set from scikit-learn. Ten baseline variables, age, sex, body mass index, average blood pressure, and six blood serum measurements were obtained for each of n = 442 diabetes patients, as well as the response of interest, a quantitative measure of disease progression one year after baseline. Number of Instances: 442 Number of Attributes:First 10 columns are numeric predictive values. Target: Column 11 is a quantitative measure of disease progression one year after baseline. Attribute Information: * age age in years * sex * bmi body mass index * bp average blood pressure * s1 tc, total serum cholesterol * s2 ldl, low-density lipoproteins * s3 hdl, high-density lipoproteins * s4 tch, total cholesterol / HDL * s5 ltg, possibly log of serum triglycerides level * s6 glu, blood sugar level
Parameters:
Name | Type | Description | Default |
---|---|---|---|
feature_type |
dtype
|
The data type of the features. Defaults to torch.float. |
float
|
target_type |
dtype
|
The data type of the targets. Defaults to torch.long. |
float
|
train |
bool
|
Whether the dataset is for training or not. Defaults to True. |
True
|
Attributes:
Name | Type | Description |
---|---|---|
data |
Tensor
|
The data features. |
targets |
Tensor
|
The data targets. |
Examples:
>>> from torch.utils.data import DataLoader
from spotpython.data.diabetes import Diabetes
import torch
dataset = Diabetes(feature_type=torch.float32, target_type=torch.float32)
# Set batch size for DataLoader
batch_size = 5
# Create DataLoader
dataloader = DataLoader(dataset, batch_size=batch_size, shuffle=False)
# Iterate over the data in the DataLoader
for batch in dataloader:
inputs, targets = batch
print(f"Batch Size: {inputs.size(0)}")
print("---------------")
print(f"Inputs: {inputs}")
print(f"Targets: {targets}")
Source code in spotpython/data/diabetes.py
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|
__getitem__(idx)
¶
Returns the feature and target at the given index.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
idx |
int
|
The index. |
required |
Returns:
Name | Type | Description |
---|---|---|
tuple |
tuple
|
A tuple containing the feature and target at the given index. |
Examples:
>>> from spotpython.light.csvdataset import CSVDataset
dataset = CSVDataset(filename='./data/spotpython/data.csv', target_column='prognosis')
print(dataset.data.shape)
print(dataset.targets.shape)
torch.Size([11, 65])
torch.Size([11])
Source code in spotpython/data/diabetes.py
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|
__len__()
¶
Returns the length of the dataset.
Returns:
Name | Type | Description |
---|---|---|
int |
int
|
The length of the dataset. |
Examples:
>>> from spotpython.light import CSVDataset
>>> dataset = CSVDataset()
>>> print(len(dataset))
60000
Source code in spotpython/data/diabetes.py
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|
extra_repr()
¶
Returns a string representation of the dataset.
Returns:
Name | Type | Description |
---|---|---|
str |
str
|
A string representation of the dataset. |
Examples:
>>> from spotpython.light import CSVDataset
>>> dataset = CSVDataset()
>>> print(dataset)
Split: Train
Source code in spotpython/data/diabetes.py
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|
get_names()
¶
Returns the names of the features.
Returns:
Name | Type | Description |
---|---|---|
list |
list
|
A list containing the names of the features. |
Examples:
>>> from spotpython.data.diabetes import Diabetes
dataset = Diabetes()
print(dataset.get_names())
["age", "sex", "bmi", "bp", "tc", "ldl", "hdl", "tch", "ltg", "glu"]
Source code in spotpython/data/diabetes.py
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